課程名稱 |
全球衛生資訊處理實務 Introduction to Data Processing in Global Health Practice |
開課學期 |
110-2 |
授課對象 |
公共衛生學院 全球衛生碩士學位學程 |
授課教師 |
謝珍玲 |
課號 |
MGH7023 |
課程識別碼 |
853EM0230 |
班次 |
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學分 |
1.0 |
全/半年 |
半年 |
必/選修 |
選修 |
上課時間 |
第2,3,4,5,6,7 週 星期四8,9,10(15:30~18:20) |
上課地點 |
公衛214 |
備註 |
本課程以英語授課。密集課程。上課期間:2022/02/24~3/31,每週3小時,合計6週。 總人數上限:20人 |
Ceiba 課程網頁 |
http://ceiba.ntu.edu.tw/1102MGH7023_data |
課程簡介影片 |
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核心能力關聯 |
核心能力與課程規劃關聯圖 |
課程大綱
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課程概述 |
This course will introduce students to a range of practical tools that can be applied in the field of global health. The course is structured in three sections covering the process of data capture, basic data cleaning and manipulation, and finally communication of data through visualization and infographics.
(1) REDCap data collection: This part of the course will provide an introduction to Research Electronic Data Capture (REDCap), a web-based tool for electronic data capture which has been widely used by the international research community. These sessions will cover the process of creating a REDCap project, designing the data collection instrument, data management features in REDCap, enabling online surveys, project testing, real-time data collection, and usage of the REDCap mobile app on mobile phones or tablets. Hands-on training will be provided after the lecture.
(2) Data cleaning and manipulation in R: This part of the course aims to give a general introduction to R, an open-source programming language for data analysis and statistics. These sessions will provide an overview of basic features and fundamental concepts in R. Students will be taught the basics of reading, cleaning, and manipulating datasets. Common types of messy data and ways to tidy them will be discussed. These discussions will include small exercises in writing R code and preparing data for analysis. Messy datasets will be provided for practice purposes.
(3) Data visualization and infographics: This section will cover the principles of and various approaches to data visualization, as well as key steps in building an effective visual. Students will learn ways to translate data into easily digestible information for various audiences using the software they know (e.g. Microsoft PowerPoint). Following taught lectures, students will work through a guided example to develop a visualization for a targeted audience.
All sessions will involve lectures followed by demonstrations, interspersed with exercises to provide students with hands-on experience. There will be a Q&A session at the end of each session. This course will be taught in English.
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課程目標 |
Upon completion of the course, students should be able to:
• have a baseline competency in REDCap
• create and design a data collection form or case reporting form in REDCap
• perform data entry online using the web-based tool and offline using the REDCap mobile app
• set up surveys and perform data quality checks in REDCap
• understand how to use REDCap for different study designs (e.g. cross-sectional, longitudinal etc.)
• design, use, and maintain a custom-made redcap database for research studies
• manage basic data types in R calculations
• conduct basic computation with matrices and data frames in R
• identify and tidy messy data to prepare for analysis using R
• understand the importance of data visualization as a communication strategy
• understand the principles and key elements that make up an effective infographic
• establish a foundation for building infographics
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課程要求 |
Students should read and review the reading material before and after the lecture. The slides of each lecture will be available on the course for students to download. Students should attend classes and submit assignments on time. |
預期每週課後學習時數 |
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Office Hours |
另約時間 備註: By appointment |
指定閱讀 |
None |
參考書目 |
1. Harris PA, Taylor R, Thielke R, Payne J, Gonzalez N, Conde JG. (2009)
Research electronic data capture (REDCap) – A metadata-driven methodology and
workflow process for providing translational research informatics support, J
Biomed Inform.
(http://www.sciencedirect.com/science/article/pii/S1532046408001226 )
2. Tippmann, S. (2014). Programming tools: Adventures with R. Nature,
517(7532), pp.109-110.
(http://www.nature.com/polopoly_fs/1.16609!/menu/main/topColumns/topLeftColumn/p
df/517109a.pdf)
3. Venables, W.N. (2018). An Introduction to R: Notes on R: A Programming
Environment for Data Analysis and Graphics (https://cran.r-
project.org/doc/manuals/r-release/R-intro.pdf)
Wickham, H. (2017). R for Data Science: Import, Tidy, Transform, Visualize, and
Model Data (http://r4ds.had.co.nz/index.html)
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評量方式 (僅供參考) |
No. |
項目 |
百分比 |
說明 |
1. |
Hands-on practice/ assignments |
50% |
Following the taught lectures, students will be given tasks to complete. |
2. |
Participation |
50% |
Attending classes on time is needed. Active participation of in-class discussion is encouraged. |
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週次 |
日期 |
單元主題 |
第2週 |
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Introduction to course materials and software, followed by introduction to REDCap: basic features, instrument building, data entry, data dictionary, survey functions, data exports and reporting, and user rights management |
第3週 |
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Advanced features in REDCap: REDCap mobile apps, branching logic and calculated fields, longitudinal projects and randomization |
第4週 |
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Introduction to R: basic features and data types |
第5週 |
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Working with Data in R (I): data cleaning and manipulation |
第6週 |
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Working with Data in R (II): data cleaning and manipulation
Introduction to Data Visualizations: principles, key steps, and examples
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第7週 |
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Data Visualizations and infographics: related tools and use of design elements (e.g. typography, color, and structure) |
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